NEURON
8.1.0
Building:
Installation
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User documentation:
Training videos
Guides
Publications about NEURON
NEURON scripting:
NEURON Python documentation
NEURON HOC documentation
Other scripting languages
Python tutorials
Python RXD tutorials
CoreNEURON
Developer documentation:
NEURON SCM and Release
NEURON Development topics
C/C++ API
Removed Features
Removed Features
Changelog
NEURON 8.1
NEURON 8.0
Contributors
Feedback / Help
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Index
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Index
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A
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B
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C
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D
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E
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F
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G
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H
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I
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J
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K
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L
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M
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N
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O
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P
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Q
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R
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S
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T
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U
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V
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W
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X
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Y
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Z
_
_in() (MechanismStandard method)
_ref_concentration (rxd.node.Node property)
(rxd.nodelist.NodeList property)
_ref_molecules (rxd.node.Node property)
_ref_value (rxd.node.Node property)
(rxd.nodelist.NodeList property)
A
ab() (HOC KSTrans method)
(KSTrans method)
abs()
built-in function
HOC built-in function
abs() (HOC Vector method)
(Vector method)
accept_action() (HOC List method)
(HOC SectionBrowser method)
(List method)
(SectionBrowser method)
access (keyword)
ACG() (HOC Random method)
(Random method)
acor() (CVode method)
(HOC CVode method)
action() (HOC MechanismStandard method)
(HOC MechanismType method)
(HOC Shape method)
(MechanismStandard method)
(MechanismType method)
(Shape method)
active() (CVode method)
(HOC CVode method)
(HOC NetCon method)
(NetCon method)
add() (HOC Matrix method)
(HOC Vector method)
(Matrix method)
(Vector method)
add_hhstate() (HOC KSChan method)
(KSChan method)
add_ksstate() (HOC KSChan method)
(KSChan method)
add_transition() (HOC KSChan method)
(KSChan method)
addexpr() (Graph method)
(HOC Graph method)
addobject() (Graph method)
(HOC Graph method)
addrand() (HOC Vector method)
(Vector method)
addvar() (Graph method)
(HOC Graph method)
adjust() (HOC VBox method)
(VBox method)
adjuster() (HOC VBox method)
(VBox method)
alias() (HOC StringFunctions method)
(StringFunctions method)
alias_list() (HOC StringFunctions method)
(StringFunctions method)
align() (Graph method)
(HOC Graph method)
allgather() (HOC ParallelContext method)
(ParallelContext method)
allobjects()
built-in function
HOC built-in function
allobjectvars()
built-in function
HOC built-in function
allprint() (FInitializeHandler method)
(HOC FInitializeHandler method)
allreduce() (HOC ParallelContext method)
(ParallelContext method)
allroots() (HOC SectionList method)
(SectionList method)
alltoall() (HOC ParallelContext method)
(ParallelContext method)
AlphaSynapse (built-in class)
(HOC built-in class)
amp() (Electrode method)
(HOC Electrode method)
amp0() (Electrode method)
(HOC Electrode method)
aopen() (File method)
(HOC File method)
APCount (built-in class)
(HOC built-in class)
append() (HOC List method)
(HOC SectionList method)
(HOC Vector method)
(List method)
(SectionList method)
(Vector method)
apply() (HOC Vector method)
(Vector method)
arc3d()
built-in function
HOC built-in function
area()
built-in function
HOC built-in function
argtype()
built-in function
HOC built-in function
arguments
,
[1]
as_numpy() (HOC Vector method)
(Vector method)
assign() (HOC Pointer method)
(Pointer method)
at() (HOC Vector method)
(Vector method)
atan()
built-in function
HOC built-in function
atan2()
built-in function
HOC built-in function
atol() (CVode method)
(HOC CVode method)
atolscale() (CVode method)
(HOC CVode method)
attr_praxis()
built-in function
HOC built-in function
axis()
built-in function
HOC built-in function
B
b_rate (rxd.Reaction property)
barrier() (HOC ParallelContext method)
(ParallelContext method)
batch_run()
built-in function
HOC built-in function
batch_save()
built-in function
HOC built-in function
BBSaveState (built-in class)
(HOC built-in class)
bcopy() (HOC Matrix method)
(Matrix method)
begin() (Graph method)
(HOC Graph method)
(HOC RangeVarPlot method)
(RangeVarPlot method)
beginline() (Graph method)
(HOC Graph method)
(HOC PlotShape method)
(HOC Shape method)
(PlotShape method)
(Shape method)
begintemplate (keyword)
,
[1]
binomial() (HOC Random method)
(Random method)
boolean_dialog()
built-in function
HOC built-in function
break (keyword)
,
[1]
broadcast() (HOC ParallelContext method)
(ParallelContext method)
browser() (HOC List method)
(List method)
brush() (Graph method)
(HOC Graph method)
buffer_size() (HOC Vector method)
(Vector method)
built-in function
abs()
allobjects()
allobjectvars()
arc3d()
area()
argtype()
atan()
atan2()
attr_praxis()
axis()
batch_run()
batch_save()
boolean_dialog()
chdir()
checkpoint()
continue_dialog()
coredump_on_error()
cos()
define_shape()
delete_section()
diam3d()
disconnect()
distance()
doEvents()
doNotify()
eqinit()
erf()
erfc()
execerror()
execute()
execute1()
exp()
fadvance()
fclamp()
fclampi()
fclampv()
fcurrent()
finitialize()
fit_praxis()
fmatrix()
fmenu()
fprint()
frecord_init()
fscan()
fstim()
fstimi()
getcwd()
getSpineArea()
getstr()
ghk()
graph()
graphmode()
hoc_pointer_()
hoc_stdout()
init()
initnrn()
int()
ion_charge()
ion_register()
ion_style()
ismembrane()
issection()
ivoc_style()
load_file()
load_func()
load_proc()
load_template()
log()
log10()
lw()
machine_name()
make_mechanism()
make_pointprocess()
mcell_ran4()
mcell_ran4_init()
n3d()
name_declared()
nernst()
neuronhome()
nrn_feenableexcept()
nrn_load_dll()
nrnglobalmechmenu()
nrnmechmenu()
nrnpointmenu()
nrnpython()
nrnsecmenu()
nrnunit_use_legacy()
nrnversion()
numarg()
object_id()
object_pop()
object_push()
parent_connection()
parent_node()
parent_section()
plot()
plotx()
ploty()
plt()
pop_section()
print_session()
printf()
prmat()
prstim()
psection()
pt3dadd()
pt3dchange()
pt3dclear()
pt3dconst()
pt3dinsert()
pt3dremove()
pt3dstyle()
push_section()
pval_praxis()
pwman_place()
quit()
regraph()
retrieveaudit()
ri()
ropen()
rxd.export.sbml()
rxd.nthread()
rxd.re_init()
rxd.set_solve_type()
rxdmath.acos()
rxdmath.acosh()
rxdmath.asin()
rxdmath.asinh()
rxdmath.atan()
rxdmath.atan2()
rxdmath.ceil()
rxdmath.copysign()
rxdmath.cos()
rxdmath.cosh()
rxdmath.degrees()
rxdmath.erf()
rxdmath.erfc()
rxdmath.exp()
rxdmath.expm1()
rxdmath.fabs()
rxdmath.factorial()
rxdmath.floor()
rxdmath.fmod()
rxdmath.gamma()
rxdmath.lgamma()
rxdmath.log()
rxdmath.log10()
rxdmath.log1p()
rxdmath.pow()
rxdmath.radians()
rxdmath.sin()
rxdmath.sinh()
rxdmath.sqrt()
rxdmath.tan()
rxdmath.tanh()
rxdmath.trunc()
rxdmath.vtrap()
save_session()
saveaudit()
secname()
section_exists()
section_orientation()
section_owner()
sectionname()
setcolor()
setSpineArea()
settext()
show_errmess_always()
show_winio()
sin()
solve()
spine3d()
sprint()
sqrt()
sred()
sscanf()
startsw()
stop_praxis()
stopsw()
strcmp()
string_dialog()
symbols()
system()
tanh()
this_node()
this_section()
topology()
units()
unix_mac_pc()
unref()
use_mcell_ran4()
variable_domain()
WinExec()
wopen()
x3d()
xbutton()
xcheckbox()
xfixedvalue()
xlabel()
xmenu()
xopen()
xpanel()
xpvalue()
xradiobutton()
xred()
xslider()
xstatebutton()
xvalue()
xvarlabel()
y3d()
z3d()
C
c() (HOC Matrix method)
(HOC Vector method)
(Matrix method)
(Vector method)
cache_efficient() (CVode method)
(HOC CVode method)
capacitance (mechanism)
,
[1]
cas() (HOC neuron.h method)
(neuron.h method)
cell() (HOC ParallelContext method)
(ParallelContext method)
(Section method)
celsius (built-in variable)
(HOC built-in variable)
charge (rxd.Species property)
chdir()
built-in function
HOC built-in function
checkpoint()
built-in function
HOC built-in function
child() (HOC SectionRef method)
children() (HOC SectionList method)
(SectionList method)
cholesky_factor() (HOC Matrix method)
chooser() (File method)
(HOC File method)
circle() (Glyph method)
(HOC Glyph method)
cl() (HOC Vector method)
(Vector method)
clamp_resist (built-in variable)
(HOC built-in variable)
close() (File method)
(Glyph method)
(HOC File method)
(HOC PWManager method)
(PWManager method)
close_path() (HOC Glyph method)
code() (MechanismType method)
color() (Graph method)
(HOC Graph method)
(HOC PlotShape method)
(HOC RangeVarPlot method)
(HOC Shape method)
(PlotShape method)
(RangeVarPlot method)
(Shape method)
color_all() (HOC PlotShape method)
(HOC Shape method)
(PlotShape method)
(Shape method)
color_list() (HOC PlotShape method)
(HOC Shape method)
(PlotShape method)
(Shape method)
colormap() (HOC PlotShape method)
(PlotShape method)
comments
,
[1]
compute() (HOC Impedance method)
(Impedance method)
concentration (rxd.node.Node property)
(rxd.nodelist.NodeList property)
concentrations() (rxd.Species method)
condition_order() (CVode method)
(HOC CVode method)
connect (keyword)
connect() (Section method)
contains() (HOC Vector method)
(Vector method)
context() (HOC ParallelContext method)
(ParallelContext method)
continue (keyword)
,
[1]
continue_dialog()
built-in function
HOC built-in function
control_point() (HOC Glyph method)
convlv() (HOC Vector method)
(Vector method)
copy() (HOC Vector method)
(Vector method)
coredump_on_error()
built-in function
HOC built-in function
correl() (HOC Vector method)
(Vector method)
cos()
built-in function
HOC built-in function
count() (HOC List method)
(HOC MechanismStandard method)
(HOC MechanismType method)
(HOC PWManager method)
(List method)
(MechanismStandard method)
(MechanismType method)
(PWManager method)
cpt() (Glyph method)
create (keyword)
create_cell() (HOC ParallelNetManager method)
(ParallelNetManager method)
crosshair_action() (Graph method)
(HOC Graph method)
current_method() (CVode method)
(HOC CVode method)
curve() (Glyph method)
curve_to() (HOC Glyph method)
CVode (built-in class)
(HOC built-in class)
D
d (rxd.node.Node property)
d2line() (GUIMath method)
(HOC GUIMath method)
d2line_seg() (GUIMath method)
(HOC GUIMath method)
dae_init_dteps() (CVode method)
(HOC CVode method)
debug (keyword)
,
[1]
debug_event() (CVode method)
(HOC CVode method)
Deck (built-in class)
(HOC built-in class)
deco() (HOC PWManager method)
(PWManager method)
default() (HOC ValueFieldEditor method)
(ValueFieldEditor method)
define_shape()
built-in function
HOC built-in function
defined_on_region() (rxd.Species method)
deiconify() (HOC PWManager method)
(PWManager method)
del() (Electrode method)
(HOC Electrode method)
delete (keyword)
,
[1]
delete_section()
built-in function
HOC built-in function
deltafac() (HOC Impedance method)
(Impedance method)
depvar (keyword)
,
[1]
deriv() (HOC Vector method)
(Vector method)
det() (HOC Matrix method)
(Matrix method)
dialog() (HOC VBox method)
(VBox method)
diam (built-in variable)
(HOC built-in variable)
diam3d()
built-in function
HOC built-in function
diam_change_count() (CVode method)
diam_changed (built-in variable)
(HOC built-in variable)
diff (rxd.nodelist.NodeList property)
dir() (File method)
(HOC File method)
disconnect()
built-in function
HOC built-in function
disconnect() (Section method)
discunif() (HOC Random method)
(Random method)
dismiss_action() (HOC VBox method)
(VBox method)
distance()
built-in function
HOC built-in function
div() (HOC Vector method)
(Vector method)
doEvents()
built-in function
HOC built-in function
done() (HOC ParallelContext method)
(ParallelContext method)
doNotify()
built-in function
HOC built-in function
dot() (HOC Vector method)
(Vector method)
double (keyword)
,
[1]
dstates() (CVode method)
(HOC CVode method)
dt (built-in variable)
(HOC built-in variable)
dt() (HOC ParallelContext method)
(ParallelContext method)
dur() (Electrode method)
(HOC Electrode method)
dur0() (Electrode method)
(HOC Electrode method)
E
Electrode (built-in class)
(HOC built-in class)
else (keyword)
,
[1]
end() (HOC RangeVarPlot method)
(HOC Timer method)
(RangeVarPlot method)
(Timer method)
endtemplate (keyword)
,
[1]
eof() (File method)
(HOC File method)
eq() (HOC Vector method)
(Vector method)
eqinit()
built-in function
HOC built-in function
eqn (keyword)
,
[1]
erase() (Glyph method)
(Graph method)
(HOC Glyph method)
(HOC Graph method)
(HOC PlotShape method)
(HOC Shape method)
(PlotShape method)
(Shape method)
erase_all() (Graph method)
(HOC Graph method)
(HOC PlotShape method)
(HOC Shape method)
(PlotShape method)
(Shape method)
erev() (HOC KSChan method)
(KSChan method)
erf()
built-in function
HOC built-in function
erfc()
built-in function
HOC built-in function
erlang() (HOC Random method)
(Random method)
error_weights() (CVode method)
(HOC CVode method)
event() (CVode method)
(HOC CVode method)
(HOC NetCon method)
(NetCon method)
event_queue_info() (CVode method)
(HOC CVode method)
event_time() (HOC ParallelContext method)
(ParallelContext method)
exec_menu() (Graph method)
(HOC Graph method)
(HOC PlotShape method)
(HOC Shape method)
(PlotShape method)
(Shape method)
execerror()
built-in function
HOC built-in function
execute()
built-in function
HOC built-in function
execute() (HOC neuron.hoc method)
(neuron.hoc method)
execute1()
built-in function
HOC built-in function
exists() (HOC SectionRef method)
(SectionRef method)
exp()
built-in function
HOC built-in function
exp() (HOC Matrix method)
(Matrix method)
Exp2Syn (built-in class)
(HOC built-in class)
expression
,
[1]
ExpSyn (built-in class)
(HOC built-in class)
external (keyword)
,
[1]
extra_scatter_gather() (CVode method)
extra_scatter_gather_remove() (CVode method)
extracellular (mechanism)
,
[1]
F
f() (CVode method)
(HOC CVode method)
(HOC KSTrans method)
(KSTrans method)
f_rate (rxd.Reaction property)
fadvance()
built-in function
HOC built-in function
family() (Graph method)
(HOC Graph method)
fastflush() (Graph method)
(HOC Graph method)
(HOC PlotShape method)
(PlotShape method)
fastpas (mechanism)
,
[1]
fclamp()
built-in function
HOC built-in function
fclampi()
built-in function
HOC built-in function
fclampv()
built-in function
HOC built-in function
fcurrent()
built-in function
HOC built-in function
feround() (GUIMath method)
(HOC GUIMath method)
fft() (HOC Vector method)
(Vector method)
File (built-in class)
(HOC built-in class)
file() (MechanismType method)
fill() (Glyph method)
(HOC Glyph method)
(HOC Vector method)
(Vector method)
filter() (HOC Vector method)
(Vector method)
finitialize()
built-in function
HOC built-in function
FInitializeHandler (built-in class)
(HOC built-in class)
fit() (HOC Vector method)
(Vector method)
fit_praxis()
built-in function
HOC built-in function
fixed() (Graph method)
(HOC Graph method)
fixed_step() (CVode method)
(HOC CVode method)
flip_to() (Deck method)
(HOC Deck method)
float_epsilon (built-in variable)
(HOC built-in variable)
floor() (HOC Vector method)
(Vector method)
flush() (File method)
(Graph method)
(HOC File method)
(HOC Graph method)
(HOC PlotShape method)
(HOC Shape method)
(PlotShape method)
(Shape method)
fmatrix()
built-in function
HOC built-in function
fmenu()
built-in function
HOC built-in function
for (keyword)
,
[1]
forall (keyword)
format_exception() (in module neuron)
,
[1]
forsec (keyword)
fprint()
built-in function
HOC built-in function
fprint() (HOC Matrix method)
(Matrix method)
frac() (HOC KSState method)
(KSState method)
fread() (HOC SaveState method)
(HOC Vector method)
(SaveState method)
(Vector method)
frecord_init()
built-in function
HOC built-in function
from_double() (HOC Vector method)
(Vector method)
from_python() (HOC Vector method)
(Vector method)
from_vector() (HOC Matrix method)
(HOC RangeVarPlot method)
(Matrix method)
(RangeVarPlot method)
fscan()
built-in function
HOC built-in function
fstim()
built-in function
HOC built-in function
fstimi()
built-in function
HOC built-in function
ftype() (HOC KSTrans method)
(KSTrans method)
full_request() (HOC VBox method)
(VBox method)
func
,
[1]
fwrite() (HOC SaveState method)
(HOC Vector method)
(SaveState method)
(Vector method)
G
gate() (HOC KSChan method)
(HOC KSState method)
(KSChan method)
(KSState method)
gather() (HOC PtrVector method)
(PtrVector method)
gatherspikes() (HOC ParallelNetManager method)
(ParallelNetManager method)
geometric() (HOC Random method)
(Random method)
geometry (rxd.Region property)
,
[1]
get() (HOC MechanismStandard method)
(HOC Vector method)
(MechanismStandard method)
(Vector method)
get_loc() (HOC pnt method)
(pnt method)
get_recordvec() (HOC NetCon method)
(NetCon method)
get_segment() (HOC pnt method)
(pnt method)
getcol() (HOC Matrix method)
(Matrix method)
getcwd()
built-in function
HOC built-in function
getdiag() (HOC Matrix method)
(Matrix method)
getline() (Graph method)
(HOC Graph method)
getname() (File method)
(HOC File method)
getrow() (HOC Matrix method)
(Matrix method)
gets() (File method)
(HOC File method)
getSpineArea()
built-in function
HOC built-in function
getstr()
built-in function
HOC built-in function
getval() (HOC Matrix method)
(HOC PtrVector method)
(Matrix method)
(PtrVector method)
ghk()
built-in function
HOC built-in function
gid2cell() (HOC ParallelContext method)
(ParallelContext method)
gid2obj() (HOC ParallelContext method)
(ParallelContext method)
gid_clear() (HOC ParallelContext method)
(ParallelContext method)
gid_connect() (HOC ParallelContext method)
(ParallelContext method)
gid_exists() (HOC ParallelContext method)
(HOC ParallelNetManager method)
(ParallelContext method)
(ParallelNetManager method)
gif() (Glyph method)
(Graph method)
(HOC Glyph method)
(HOC Graph method)
Glyph (built-in class)
(HOC built-in class)
glyph() (Glyph method)
(Graph method)
(HOC Glyph method)
(HOC Graph method)
gmax() (HOC KSChan method)
(KSChan method)
Graph (built-in class)
(HOC built-in class)
graph()
built-in function
HOC built-in function
graphmode()
built-in function
HOC built-in function
group() (HOC PWManager method)
(PWManager method)
GUIMath (built-in class)
(HOC built-in class)
H
has_loc() (HOC pnt method)
(pnt method)
has_net_event() (HOC MechanismType method)
(MechanismType method)
has_parent() (HOC SectionRef method)
(SectionRef method)
has_trueparent() (HOC SectionRef method)
(SectionRef method)
HBox (built-in class)
(HOC built-in class)
head() (HOC StringFunctions method)
(StringFunctions method)
help (keyword)
,
[1]
hh (mechanism)
,
[1]
hide() (HOC PWManager method)
(PWManager method)
hinton() (HOC PlotShape method)
(PlotShape method)
hist() (HOC Vector method)
(Vector method)
histogram() (HOC Vector method)
(Vector method)
hname() (Section method)
HOC built-in function
abs()
allobjects()
allobjectvars()
arc3d()
area()
argtype()
atan()
atan2()
attr_praxis()
axis()
batch_run()
batch_save()
boolean_dialog()
chdir()
checkpoint()
continue_dialog()
coredump_on_error()
cos()
define_shape()
delete_section()
diam3d()
disconnect()
distance()
doEvents()
doNotify()
eqinit()
erf()
erfc()
execerror()
execute()
execute1()
exp()
fadvance()
fclamp()
fclampi()
fclampv()
fcurrent()
finitialize()
fit_praxis()
fmatrix()
fmenu()
fprint()
frecord_init()
fscan()
fstim()
fstimi()
getcwd()
getSpineArea()
getstr()
ghk()
graph()
graphmode()
hoc_pointer_()
hoc_stdio()
hocmech()
init()
initnrn()
int()
ion_charge()
ion_register()
ion_style()
ismembrane()
issection()
ivoc_style()
load_file()
load_func()
load_proc()
load_template()
log()
log10()
lw()
machine_name()
mcell_ran4()
mcell_ran4_init()
n3d()
name_declared()
nernst()
neuronhome()
nrn_feenableexcept()
nrn_load_dll()
nrnglobalmechmenu()
nrnmechmenu()
nrnpointmenu()
nrnpython()
nrnsecmenu()
nrnversion()
numarg()
object_id()
object_pop()
object_push()
parent_connection()
parent_node()
parent_section()
plot()
plotx()
ploty()
plt()
pop_section()
print_session()
printf()
prmat()
prstim()
psection()
pt3dadd()
pt3dchange()
pt3dclear()
pt3dconst()
pt3dinsert()
pt3dremove()
pt3dstyle()
push_section()
pval_praxis()
pwman_place()
quit()
regraph()
retrieveaudit()
ri()
ropen()
rxd.nthread()
rxd.re_init()
rxd.set_solve_type()
save_session()
saveaudit()
secname()
section_exists()
section_orientation()
section_owner()
sectionname()
setcolor()
setSpineArea()
settext()
show_errmess_always()
show_winio()
sin()
solve()
spine3d()
sprint()
sqrt()
sred()
sscanf()
startsw()
stop_praxis()
stopsw()
strcmp()
string_dialog()
symbols()
system()
tanh()
this_node()
this_section()
topology()
units()
unix_mac_pc()
unref()
use_mcell_ran4()
variable_domain()
WinExec()
wopen()
x3d()
xbutton()
xcheckbox()
xfixedvalue()
xlabel()
xmenu()
xopen()
xpanel()
xpvalue()
xradiobutton()
xred()
xslider()
xstatebutton()
xvalue()
xvarlabel()
y3d()
z3d()
hoc_ac() (HOC neuron.hoc method)
(neuron.hoc method)
hoc_ac_ (built-in variable)
(HOC built-in variable)
hoc_cross_x_ (built-in variable)
(HOC built-in variable)
hoc_cross_y_ (built-in variable)
(HOC built-in variable)
hoc_obj_ (built-in variable)
(HOC built-in variable)
hoc_pointer_()
built-in function
HOC built-in function
hoc_stdio()
HOC built-in function
hoc_stdout()
built-in function
HocError
,
[1]
hocmech()
HOC built-in function
Holding() (Electrode method)
(HOC Electrode method)
hypergeo() (HOC Random method)
(Random method)
I
IClamp (built-in class)
(HOC built-in class)
IClamp() (Electrode method)
(HOC Electrode method)
iconify() (HOC PWManager method)
(PWManager method)
id() (HOC ParallelContext method)
(ParallelContext method)
id_bbs() (HOC ParallelContext method)
(ParallelContext method)
id_world() (HOC ParallelContext method)
(ParallelContext method)
ident() (HOC Matrix method)
(Matrix method)
if (keyword)
,
[1]
ifsec (keyword)
ignore() (BBSaveState method)
(HOC BBSaveState method)
Impedance (built-in class)
(HOC built-in class)
in() (HOC MechanismStandard method)
include_flux() (rxd.node.Node method)
(rxd.nodelist.NodeList method)
ind() (HOC Vector method)
(Vector method)
index() (HOC KSGate method)
(HOC KSState method)
(HOC KSTrans method)
(HOC List method)
(HOC Vector method)
(KSGate method)
(KSState method)
(KSTrans method)
(List method)
(Vector method)
indgen() (HOC Vector method)
(Vector method)
indices() (rxd.Species method)
indvwhere() (HOC Vector method)
(Vector method)
indwhere() (HOC Vector method)
(Vector method)
inf() (HOC Vector method)
(Vector method)
inftau() (HOC KSTrans method)
(KSTrans method)
init()
built-in function
HOC built-in function
init() (in module neuron)
,
[1]
initnrn()
built-in function
HOC built-in function
input() (HOC Impedance method)
(Impedance method)
input_phase() (HOC Impedance method)
(Impedance method)
insert (keyword)
,
[1]
inside (rxd attribute)
inside() (GUIMath method)
(HOC GUIMath method)
insrt() (HOC List method)
(HOC Vector method)
(List method)
(Vector method)
int()
built-in function
HOC built-in function
integ_time() (HOC ParallelContext method)
(ParallelContext method)
integral() (HOC Vector method)
(Vector method)
intercept() (Deck method)
(HOC Deck method)
(HOC VBox method)
(VBox method)
internal_type() (HOC MechanismType method)
(MechanismType method)
interpolate() (HOC Vector method)
(Vector method)
IntFire1 (built-in class)
(HOC built-in class)
IntFire2 (built-in class)
(HOC built-in class)
IntFire4 (built-in class)
(HOC built-in class)
inverse() (HOC Matrix method)
(Matrix method)
ion() (HOC KSChan method)
(KSChan method)
ion_charge()
built-in function
HOC built-in function
ion_register()
built-in function
HOC built-in function
ion_style()
built-in function
HOC built-in function
is_artificial() (HOC MechanismType method)
(HOC StringFunctions method)
(MechanismType method)
(StringFunctions method)
is_cas() (HOC SectionRef method)
(SectionRef method)
is_mapped() (HOC PWManager method)
(PWManager method)
is_name() (HOC StringFunctions method)
(StringFunctions method)
is_netcon_target() (HOC MechanismType method)
(MechanismType method)
is_point_process() (HOC StringFunctions method)
(StringFunctions method)
ismapped() (HOC VBox method)
(VBox method)
ismembrane()
built-in function
HOC built-in function
isopen() (File method)
(HOC File method)
issection()
built-in function
HOC built-in function
iterator
,
[1]
iv_type() (HOC KSChan method)
(KSChan method)
ivoc_style()
built-in function
HOC built-in function
J
jacobian() (CVode method)
(HOC CVode method)
jwindow() (HOC PWManager method)
(PWManager method)
K
KSChan (built-in class)
(HOC built-in class)
KSGate (built-in class)
(HOC built-in class)
KSState (built-in class)
(HOC built-in class)
KSTrans (built-in class)
(HOC built-in class)
L
L (built-in variable)
(HOC built-in variable)
l() (Glyph method)
label() (Glyph method)
(Graph method)
(HOC Glyph method)
(HOC Graph method)
(HOC PlotShape method)
(HOC Shape method)
(HOC Vector method)
(PlotShape method)
(PtrVector method)
(Shape method)
(Vector method)
landscape() (HOC PWManager method)
(PWManager method)
leader() (HOC PWManager method)
(PWManager method)
left() (HOC RangeVarPlot method)
(HOC StringFunctions method)
(RangeVarPlot method)
(StringFunctions method)
len() (HOC StringFunctions method)
(StringFunctions method)
len_scale() (HOC PlotShape method)
(HOC Shape method)
(PlotShape method)
(Shape method)
ligand() (HOC KSChan method)
(HOC KSTrans method)
(KSChan method)
(KSTrans method)
line() (Graph method)
(HOC Graph method)
(HOC PlotShape method)
(HOC Shape method)
(HOC Vector method)
(PlotShape method)
(Shape method)
(Vector method)
line_info() (Graph method)
(HOC Graph method)
line_to() (HOC Glyph method)
LinearMechanism (built-in class)
(HOC built-in class)
List (built-in class)
(HOC built-in class)
list() (HOC RangeVarPlot method)
(RangeVarPlot method)
load_file()
built-in function
HOC built-in function
load_func()
built-in function
HOC built-in function
load_mechanisms() (in module neuron)
,
[1]
load_proc()
built-in function
HOC built-in function
load_template()
built-in function
HOC built-in function
loc() (HOC Impedance method)
(HOC pnt method)
(Impedance method)
(pnt method)
local (keyword)
,
[1]
localobj (keyword)
,
[1]
Location() (Electrode method)
(HOC Electrode method)
log()
built-in function
HOC built-in function
log() (HOC Vector method)
(Vector method)
log10()
built-in function
HOC built-in function
log10() (HOC Vector method)
(Vector method)
lognormal() (HOC Random method)
(Random method)
look() (HOC ParallelContext method)
(ParallelContext method)
look_take() (HOC ParallelContext method)
(ParallelContext method)
lw()
built-in function
HOC built-in function
M
m() (Glyph method)
machine_name()
built-in function
HOC built-in function
mag() (HOC Vector method)
(Vector method)
make() (HOC MechanismType method)
(MechanismType method)
make_mechanism()
built-in function
make_pointprocess()
built-in function
makeFamily (HOC function)
,
[1]
manager() (HOC PWManager method)
(PWManager method)
map() (Deck method)
(HOC Deck method)
(HOC PWManager method)
(HOC TextEditor method)
(HOC VBox method)
(PWManager method)
(TextEditor method)
(VBox method)
mark() (Graph method)
(HOC Graph method)
(HOC PlotShape method)
(HOC Shape method)
(HOC Vector method)
(PlotShape method)
(Shape method)
(Vector method)
Matrix (built-in class)
(HOC built-in class)
Matrix.x (built-in variable)
(HOC built-in variable)
max() (HOC Vector method)
(Vector method)
max_histogram() (HOC ParallelContext method)
(ParallelContext method)
max_ind() (HOC Vector method)
(Vector method)
maxorder() (CVode method)
(HOC CVode method)
maxstep() (CVode method)
(HOC CVode method)
mcell_ran4()
built-in function
HOC built-in function
mcell_ran4_init()
built-in function
HOC built-in function
MCellRan4() (HOC Random method)
(Random method)
mean() (HOC Vector method)
(Vector method)
meansqerr() (HOC Vector method)
(Vector method)
mech_time() (HOC ParallelContext method)
(ParallelContext method)
MechanismStandard (built-in class)
(HOC built-in class)
MechanismType (built-in class)
(HOC built-in class)
medfltr() (HOC Vector method)
(Vector method)
median() (HOC Vector method)
(Vector method)
membrane (rxd attribute)
menu() (HOC MechanismType method)
(MechanismType method)
menu_action() (Graph method)
(HOC Graph method)
(HOC PlotShape method)
(HOC Shape method)
(PlotShape method)
(Shape method)
menu_remove() (Graph method)
(HOC Graph method)
menu_tool() (Graph method)
(HOC Graph method)
(HOC PlotShape method)
(HOC Shape method)
(PlotShape method)
(Shape method)
MenuExpore (HOC class)
,
[1]
min() (HOC Vector method)
(Vector method)
min_ind() (HOC Vector method)
(Vector method)
minstep() (CVode method)
(HOC CVode method)
mktemp() (File method)
(HOC File method)
MLCG() (HOC Random method)
(Random method)
module
neuron
,
[1]
molecules (rxd.node.Node property)
move_last() (Deck method)
(HOC Deck method)
move_to() (HOC Glyph method)
mpi_init() (ParallelContext method)
mpiabort_on_error() (ParallelContext method)
mul() (HOC Vector method)
(Vector method)
mulm() (HOC Matrix method)
(Matrix method)
MulRunFitter
,
[1]
muls() (HOC Matrix method)
(Matrix method)
multisplit() (HOC ParallelContext method)
(ParallelContext method)
mulv() (HOC Matrix method)
(Matrix method)
N
n3d()
built-in function
HOC built-in function
name (rxd.Region property)
,
[1]
(rxd.Species property)
name() (HOC KSChan method)
(HOC KSState method)
(HOC MechanismStandard method)
(HOC PWManager method)
(KSChan method)
(KSState method)
(MechanismStandard method)
(PWManager method)
(Section method)
name_declared()
built-in function
HOC built-in function
nc_append() (HOC ParallelNetManager method)
(ParallelNetManager method)
nchild() (HOC SectionRef method)
(SectionRef method)
ncol() (HOC Matrix method)
(Matrix method)
nearest() (HOC PlotShape method)
(HOC Shape method)
(PlotShape method)
(Shape method)
negexp() (HOC Random method)
(Random method)
nernst()
built-in function
HOC built-in function
NetCon (built-in class)
(HOC built-in class)
NetCon.delay (built-in variable)
(HOC built-in variable)
NetCon.threshold (built-in variable)
(HOC built-in variable)
NetCon.weight (built-in variable)
(HOC built-in variable)
NetCon.x (built-in variable)
(HOC built-in variable)
netconlist() (CVode method)
(HOC CVode method)
NetStim (built-in class)
(HOC built-in class)
neuron
module
,
[1]
neuron.h.Section (built-in class)
(HOC built-in class)
neuron.hoc.HocObject (built-in class)
(HOC built-in class)
neuronhome()
built-in function
HOC built-in function
new (keyword)
,
[1]
new_hoc_class() (in module neuron)
,
[1]
new_path() (HOC Glyph method)
new_point_process() (in module neuron)
,
[1]
ngate() (HOC KSChan method)
(KSChan method)
nhost() (HOC ParallelContext method)
(ParallelContext method)
nhost_bbs() (HOC ParallelContext method)
(ParallelContext method)
nhost_world() (HOC ParallelContext method)
(ParallelContext method)
nligand() (HOC KSChan method)
(KSChan method)
nodes (rxd.Species property)
normal() (HOC Random method)
(Random method)
nrn_dll() (in module neuron)
,
[1]
nrn_dll_sym() (in module neuron)
,
[1]
nrn_dll_sym_nt() (in module neuron)
,
[1]
nrn_feenableexcept()
built-in function
HOC built-in function
nrn_load_dll()
built-in function
HOC built-in function
nrn_region (rxd.Region property)
,
[1]
nrncore_run() (ParallelContext method)
nrncore_write() (ParallelContext method)
nrnglobalmechmenu()
built-in function
HOC built-in function
nrnmechmenu()
built-in function
HOC built-in function
nrnpointmenu()
built-in function
HOC built-in function
nrnpython()
built-in function
HOC built-in function
nrnsecmenu()
built-in function
HOC built-in function
nrnunit_use_legacy()
built-in function
nrnversion()
built-in function
HOC built-in function
nrow() (HOC Matrix method)
(Matrix method)
nseg (HOC built-in variable)
nstate() (HOC KSChan method)
(HOC KSGate method)
(KSChan method)
(KSGate method)
nthread() (HOC ParallelContext method)
(ParallelContext method)
ntrans() (HOC KSChan method)
(KSChan method)
NULLobject
,
[1]
numarg()
built-in function
HOC built-in function
numpy_element_ref() (in module neuron)
,
[1]
O
o() (HOC List method)
(List method)
obfunc
,
[1]
object() (HOC List method)
(List method)
object_id()
built-in function
HOC built-in function
object_pop()
built-in function
HOC built-in function
object_push()
built-in function
HOC built-in function
objectvar (keyword)
,
[1]
objref (keyword)
,
[1]
observe() (HOC PlotShape method)
(HOC Shape method)
(PlotShape method)
(Shape method)
order() (CVode method)
(HOC CVode method)
orientation() (Section method)
origin() (HOC RangeVarPlot method)
(RangeVarPlot method)
out() (HOC MechanismStandard method)
(MechanismStandard method)
outputcell() (HOC ParallelContext method)
(ParallelContext method)
P
pack() (HOC ParallelContext method)
(ParallelContext method)
panel() (HOC MechanismStandard method)
(MechanismStandard method)
paper_place() (HOC PWManager method)
(PWManager method)
ParallelContext (built-in class)
(HOC built-in class)
ParallelNetManager (built-in class)
(HOC built-in class)
parent() (HOC SectionRef method)
parent_connection()
built-in function
HOC built-in function
parent_node()
built-in function
HOC built-in function
parent_section()
built-in function
HOC built-in function
parentseg() (Section method)
parm() (HOC KSTrans method)
(KSTrans method)
partition() (HOC ParallelContext method)
(ParallelContext method)
pas (mechanism)
,
[1]
path() (Glyph method)
PatternStim (built-in class)
pcontinue() (HOC ParallelNetManager method)
(ParallelNetManager method)
pinit() (HOC ParallelNetManager method)
(ParallelNetManager method)
play() (HOC Random method)
(HOC Vector method)
(Random method)
(Vector method)
play_remove() (HOC Vector method)
(Vector method)
plot()
built-in function
HOC built-in function
plot() (Graph method)
(HOC Graph method)
(HOC Vector method)
(PlotShape method)
(PtrVector method)
(RangeVarPlot method)
(Vector method)
ploterr() (HOC Vector method)
(Vector method)
PlotShape (built-in class)
(HOC built-in class)
plotx()
built-in function
HOC built-in function
ploty()
built-in function
HOC built-in function
plt()
built-in function
HOC built-in function
point_mark() (HOC Shape method)
(Shape method)
point_mark_remove() (HOC Shape method)
(Shape method)
Pointer (built-in class)
(HOC built-in class)
PointProcessLocator (HOC class)
,
[1]
poisson() (HOC Random method)
(Random method)
pop_section()
built-in function
HOC built-in function
post() (HOC ParallelContext method)
(ParallelContext method)
postcell() (HOC NetCon method)
(NetCon method)
postcelllist() (HOC NetCon method)
(NetCon method)
postloc() (HOC NetCon method)
(NetCon method)
postseg() (NetCon method)
pow() (HOC Matrix method)
(HOC Vector method)
(Matrix method)
(Vector method)
power() (HOC KSGate method)
(KSGate method)
pp_begin() (HOC MechanismType method)
(MechanismType method)
pp_next() (HOC MechanismType method)
(MechanismType method)
pr() (HOC KSChan method)
(KSChan method)
prcellstate() (HOC ParallelContext method)
(ParallelContext method)
pre() (HOC NetCon method)
(NetCon method)
precell() (HOC NetCon method)
(NetCon method)
precelllist() (HOC NetCon method)
(NetCon method)
prelist() (HOC NetCon method)
(NetCon method)
preloc() (HOC NetCon method)
(NetCon method)
prepend() (HOC List method)
(List method)
preseg() (NetCon method)
print (keyword)
,
[1]
print_event_queue() (CVode method)
(HOC CVode method)
print_session()
built-in function
HOC built-in function
printf()
built-in function
HOC built-in function
printf() (File method)
(HOC File method)
(HOC Matrix method)
(HOC Vector method)
(Matrix method)
(Vector method)
printfile() (Graph method)
(HOC Graph method)
(HOC PlotShape method)
(HOC PWManager method)
(HOC Shape method)
(PlotShape method)
(PWManager method)
(Shape method)
printnames() (HOC SectionList method)
(SectionList method)
priority() (HOC VBox method)
(VBox method)
prmat()
built-in function
HOC built-in function
proc
,
[1]
prstat() (HOC ParallelNetManager method)
(ParallelNetManager method)
prstim()
built-in function
HOC built-in function
prun() (HOC ParallelNetManager method)
(ParallelNetManager method)
psection()
built-in function
HOC built-in function
pset() (HOC PtrVector method)
(PtrVector method)
psolve() (HOC ParallelContext method)
(HOC ParallelNetManager method)
(ParallelContext method)
(ParallelNetManager method)
psth() (HOC Vector method)
(Vector method)
pt3dadd()
built-in function
HOC built-in function
pt3dchange()
built-in function
HOC built-in function
pt3dclear()
built-in function
HOC built-in function
pt3dconst()
built-in function
HOC built-in function
pt3dinsert()
built-in function
HOC built-in function
pt3dremove()
built-in function
HOC built-in function
pt3dstyle()
built-in function
HOC built-in function
ptr_update_callback() (HOC PtrVector method)
(PtrVector method)
PtrVector (built-in class)
(HOC built-in class)
public (keyword)
,
[1]
push_section()
built-in function
HOC built-in function
push_selected() (HOC PlotShape method)
(HOC Shape method)
(PlotShape method)
(Shape method)
pval_praxis()
built-in function
HOC built-in function
pwman_place()
built-in function
HOC built-in function
PWManager (built-in class)
(HOC built-in class)
py_allgather() (ParallelContext method)
py_alltoall() (HOC ParallelContext method)
(ParallelContext method)
py_broadcast() (ParallelContext method)
py_gather() (ParallelContext method)
py_scatter() (ParallelContext method)
pyret() (HOC ParallelContext method)
(ParallelContext method)
PythonObject (built-in class)
(HOC built-in class)
Q
queue_mode() (CVode method)
(HOC CVode method)
quit()
built-in function
HOC built-in function
quit() (in module neuron)
,
[1]
R
Ra (built-in variable)
(HOC built-in variable)
Random (built-in class)
(HOC built-in class)
Random123() (HOC Random method)
(Random method)
Random123_globalindex() (HOC Random method)
(Random method)
RangeVarPlot (built-in class)
(HOC built-in class)
ratio() (HOC Impedance method)
(Impedance method)
re_init() (CVode method)
(HOC CVode method)
(rxd.Species method)
read (keyword)
,
[1]
readonly() (HOC TextEditor method)
(TextEditor method)
rebin() (HOC Vector method)
(Vector method)
record() (CVode method)
(HOC CVode method)
(HOC NetCon method)
(HOC Vector method)
(NetCon method)
(Vector method)
record_remove() (CVode method)
(HOC CVode method)
reduce() (HOC Vector method)
(Vector method)
ref() (HOC VBox method)
(VBox method)
references() (HOC StringFunctions method)
(StringFunctions method)
region (rxd.node.Node property)
(rxd.nodelist.NodeList property)
regions (rxd.Species property)
register_cell() (HOC ParallelNetManager method)
(ParallelNetManager method)
register_savestate() (in module neuron)
,
[1]
regraph()
built-in function
HOC built-in function
relative() (Graph method)
(HOC Graph method)
remove() (Deck method)
(HOC Deck method)
(HOC List method)
(HOC MechanismType method)
(HOC SectionList method)
(HOC Vector method)
(List method)
(MechanismType method)
(SectionList method)
(Vector method)
remove_all() (HOC List method)
(List method)
remove_last() (Deck method)
(HOC Deck method)
remove_state() (HOC KSChan method)
(KSChan method)
remove_transition() (HOC KSChan method)
(KSChan method)
repick() (HOC Random method)
(Random method)
resample() (HOC Vector method)
(Vector method)
resize() (HOC Matrix method)
(HOC PtrVector method)
(HOC Vector method)
(Matrix method)
(PtrVector method)
(Vector method)
restore() (HOC SaveState method)
(SaveState method)
restore_test() (BBSaveState method)
(HOC BBSaveState method)
retrieveaudit()
built-in function
HOC built-in function
return (keyword)
,
[1]
Returnlevel() (Electrode method)
(HOC Electrode method)
retval() (HOC ParallelContext method)
(ParallelContext method)
reverse() (HOC Vector method)
(Vector method)
ri()
built-in function
HOC built-in function
right() (HOC RangeVarPlot method)
(HOC StringFunctions method)
(RangeVarPlot method)
(StringFunctions method)
root() (HOC SectionRef method)
ropen()
built-in function
HOC built-in function
ropen() (File method)
(HOC File method)
rotate() (HOC PlotShape method)
(HOC Shape method)
(HOC Vector method)
(PlotShape method)
(Shape method)
(Vector method)
round_robin() (HOC ParallelNetManager method)
(ParallelNetManager method)
rtol() (CVode method)
(HOC CVode method)
run() (HOC SymChooser method)
(in module neuron)
,
[1]
(SymChooser method)
runworker() (HOC ParallelContext method)
(ParallelContext method)
rxd.DistributedBoundary (built-in class)
rxd.export.sbml()
built-in function
rxd.Extracellular (built-in class)
(HOC built-in class)
rxd.FixedCrossSection (built-in class)
rxd.FixedPerimeter (built-in class)
rxd.FractionalVolume (built-in class)
rxd.MultiCompartmentReaction (built-in class)
(HOC built-in class)
rxd.node.Node (built-in class)
rxd.node.Node1D (built-in class)
rxd.node.Node3D (built-in class)
rxd.node.NodeExtracellular (built-in class)
rxd.nodelist.NodeList (built-in class)
(HOC built-in class)
rxd.nthread()
built-in function
HOC built-in function
rxd.Parameter (built-in class)
(HOC built-in class)
rxd.Rate (built-in class)
(HOC built-in class)
rxd.re_init()
built-in function
HOC built-in function
rxd.Reaction (built-in class)
(HOC built-in class)
rxd.Region (built-in class)
(HOC built-in class)
rxd.RxDException (built-in class)
(HOC built-in class)
rxd.ScalableBorder (built-in class)
rxd.set_solve_type()
built-in function
HOC built-in function
rxd.Shell (built-in class)
rxd.Species (built-in class)
(HOC built-in class)
rxd.State (built-in class)
(HOC built-in class)
rxdmath.acos()
built-in function
rxdmath.acosh()
built-in function
rxdmath.asin()
built-in function
rxdmath.asinh()
built-in function
rxdmath.atan()
built-in function
rxdmath.atan2()
built-in function
rxdmath.ceil()
built-in function
rxdmath.copysign()
built-in function
rxdmath.cos()
built-in function
rxdmath.cosh()
built-in function
rxdmath.degrees()
built-in function
rxdmath.erf()
built-in function
rxdmath.erfc()
built-in function
rxdmath.exp()
built-in function
rxdmath.expm1()
built-in function
rxdmath.fabs()
built-in function
rxdmath.factorial()
built-in function
rxdmath.floor()
built-in function
rxdmath.fmod()
built-in function
rxdmath.gamma()
built-in function
rxdmath.lgamma()
built-in function
rxdmath.log()
built-in function
rxdmath.log10()
built-in function
rxdmath.log1p()
built-in function
rxdmath.pow()
built-in function
rxdmath.radians()
built-in function
rxdmath.sin()
built-in function
rxdmath.sinh()
built-in function
rxdmath.sqrt()
built-in function
rxdmath.tan()
built-in function
rxdmath.tanh()
built-in function
rxdmath.trunc()
built-in function
rxdmath.vtrap()
built-in function
S
s() (Glyph method)
(HOC Pointer method)
(Pointer method)
satisfies() (rxd.node.Node method)
(rxd.node.Node1D method)
(rxd.node.Node3D method)
(rxd.node.NodeExtracellular method)
save() (Deck method)
(HOC Deck method)
(HOC MechanismStandard method)
(HOC PWManager method)
(HOC SaveState method)
(HOC VBox method)
(MechanismStandard method)
(PWManager method)
(SaveState method)
(VBox method)
save_name() (Graph method)
(HOC Graph method)
(HOC PlotShape method)
(HOC Shape method)
(PlotShape method)
(Shape method)
save_session()
built-in function
HOC built-in function
save_test() (BBSaveState method)
(HOC BBSaveState method)
saveaudit()
built-in function
HOC built-in function
SaveState (built-in class)
(HOC built-in class)
scale() (HOC PlotShape method)
(HOC PWManager method)
(HOC Vector method)
(PlotShape method)
(PWManager method)
(Vector method)
scanf() (HOC Matrix method)
(HOC Vector method)
(Matrix method)
(Vector method)
scanstr() (File method)
(HOC File method)
scantil() (HOC Vector method)
(Vector method)
scanvar() (File method)
(HOC File method)
scatter() (HOC PtrVector method)
(PtrVector method)
scroll_pos() (HOC List method)
(List method)
sec (rxd.node.Node1D property)
(rxd.node.Node3D property)
sec() (HOC SectionRef method)
sec_in_thread() (HOC ParallelContext method)
(ParallelContext method)
SEClamp (built-in class)
(HOC built-in class)
secname()
built-in function
HOC built-in function
secondorder (built-in variable)
(HOC built-in variable)
seconds() (HOC Timer method)
(Timer method)
secs (rxd.Region property)
,
[1]
Section (built-in class)
Section.nseg (built-in variable)
section_exists()
built-in function
HOC built-in function
section_orientation()
built-in function
HOC built-in function
section_owner()
built-in function
HOC built-in function
SectionBrowser (built-in class)
(HOC built-in class)
SectionList (built-in class)
(HOC built-in class)
sectionname()
built-in function
HOC built-in function
SectionRef (built-in class)
(HOC built-in class)
SectionRef.child (built-in variable)
SectionRef.parent (built-in variable)
SectionRef.root (built-in variable)
SectionRef.sec (built-in variable)
SectionRef.trueparent (built-in variable)
seek() (File method)
(HOC File method)
segment (rxd.node.Node1D property)
(rxd.node.Node3D property)
(rxd.nodelist.NodeList property)
select() (HOC List method)
(HOC MechanismType method)
(HOC SectionBrowser method)
(HOC Shape method)
(List method)
(MechanismType method)
(SectionBrowser method)
(Shape method)
select_action() (HOC List method)
(HOC SectionBrowser method)
(List method)
(SectionBrowser method)
selected() (HOC List method)
(HOC MechanismType method)
(List method)
(MechanismType method)
send_time() (HOC ParallelContext method)
(ParallelContext method)
seq() (HOC Random method)
(Random method)
set() (HOC MechanismStandard method)
(HOC Vector method)
(MechanismStandard method)
(Vector method)
set_f() (HOC KSTrans method)
(KSTrans method)
set_gid2node() (HOC ParallelContext method)
(HOC ParallelNetManager method)
(ParallelContext method)
(ParallelNetManager method)
set_maxstep() (HOC ParallelContext method)
(ParallelContext method)
setcol() (HOC Matrix method)
(Matrix method)
setcolor()
built-in function
HOC built-in function
setdata (mechanism)
,
[1]
setdiag() (HOC Matrix method)
(Matrix method)
setpointer (keyword)
,
[1]
setpost() (HOC NetCon method)
(NetCon method)
setrand() (HOC Vector method)
(Vector method)
setrow() (HOC Matrix method)
(Matrix method)
setSpineArea()
built-in function
HOC built-in function
setstructure() (HOC KSChan method)
(KSChan method)
settext()
built-in function
HOC built-in function
setup_transfer() (HOC ParallelContext method)
(ParallelContext method)
setval() (HOC Matrix method)
(HOC PtrVector method)
(Matrix method)
(PtrVector method)
Shape (built-in class)
(HOC built-in class)
show() (HOC PlotShape method)
(HOC Shape method)
(PlotShape method)
(Shape method)
show_errmess_always()
built-in function
HOC built-in function
show_winio()
built-in function
HOC built-in function
simgraph() (Graph method)
(HOC Graph method)
simgraph_remove() (CVode method)
(HOC CVode method)
sin()
built-in function
HOC built-in function
sin() (HOC Vector method)
(Vector method)
sindex() (HOC KSGate method)
(KSGate method)
size() (Graph method)
(HOC Graph method)
(HOC PlotShape method)
(HOC PtrVector method)
(HOC Shape method)
(HOC VBox method)
(HOC Vector method)
(PlotShape method)
(PtrVector method)
(Shape method)
(VBox method)
(Vector method)
smhist() (HOC Vector method)
(Vector method)
snap() (HOC PWManager method)
(PWManager method)
solv() (HOC Matrix method)
(Matrix method)
solve()
built-in function
HOC built-in function
solve() (CVode method)
(HOC CVode method)
sort() (HOC Vector method)
(Vector method)
sortindex() (HOC Vector method)
(Vector method)
source_var() (HOC ParallelContext method)
(ParallelContext method)
spctrm() (HOC Vector method)
(Vector method)
species (rxd.node.Node property)
(rxd.nodelist.NodeList property)
spgetrowval() (HOC Matrix method)
(Matrix method)
spike_compress() (HOC ParallelContext method)
(ParallelContext method)
spike_record() (HOC ParallelContext method)
(HOC ParallelNetManager method)
(ParallelContext method)
(ParallelNetManager method)
spike_stat() (CVode method)
(HOC CVode method)
spike_statistics() (HOC ParallelContext method)
(ParallelContext method)
spikebin() (HOC Vector method)
(Vector method)
spine3d()
built-in function
HOC built-in function
splitcell() (HOC ParallelContext method)
(HOC ParallelNetManager method)
(ParallelContext method)
(ParallelNetManager method)
sprint()
built-in function
HOC built-in function
sprowlen() (HOC Matrix method)
(Matrix method)
sqrt()
built-in function
HOC built-in function
sqrt() (HOC Vector method)
(Vector method)
src() (HOC KSTrans method)
(KSTrans method)
srcgid() (HOC NetCon method)
(NetCon method)
sred()
built-in function
HOC built-in function
sscanf()
built-in function
HOC built-in function
start() (HOC Timer method)
(Timer method)
startsw()
built-in function
HOC built-in function
state() (HOC KSChan method)
(HOC StateTransitionEvent method)
(KSChan method)
(StateTransitionEvent method)
state_magnitudes() (CVode method)
(HOC CVode method)
statement
,
[1]
statename() (CVode method)
(HOC CVode method)
states (rxd.Species property)
states() (CVode method)
(HOC CVode method)
StateTransitionEvent (built-in class)
(HOC built-in class)
statistics() (CVode method)
(HOC CVode method)
stderr() (HOC Vector method)
(Vector method)
stdev() (HOC Vector method)
(Vector method)
step_time() (HOC ParallelContext method)
(ParallelContext method)
step_wait() (HOC ParallelContext method)
stiff() (CVode method)
(HOC CVode method)
stop (keyword)
,
[1]
stop_praxis()
built-in function
HOC built-in function
stoprun (built-in variable)
(HOC built-in variable)
stopsw()
built-in function
HOC built-in function
store_events() (CVode method)
(HOC CVode method)
strcmp()
built-in function
HOC built-in function
strdef (keyword)
,
[1]
string_dialog()
built-in function
HOC built-in function
StringFunctions (built-in class)
(HOC built-in class)
stroke() (HOC Glyph method)
structure_change_count() (CVode method)
sub() (HOC Vector method)
(Vector method)
submit() (HOC ParallelContext method)
(ParallelContext method)
substr() (HOC StringFunctions method)
(StringFunctions method)
subtree() (HOC SectionList method)
(Section method)
(SectionList method)
subworlds() (HOC ParallelContext method)
(ParallelContext method)
sum() (HOC Vector method)
(Vector method)
sumgauss() (HOC Vector method)
(Vector method)
sumsq() (HOC Vector method)
(Vector method)
surface_area (rxd.node.Node1D property)
(rxd.node.Node3D property)
(rxd.nodelist.NodeList property)
svd() (HOC Matrix method)
(Matrix method)
symbols()
built-in function
HOC built-in function
SymChooser (built-in class)
(HOC built-in class)
symmeig() (HOC Matrix method)
(Matrix method)
syn() (HOC NetCon method)
(NetCon method)
synlist() (HOC NetCon method)
(NetCon method)
syntax (HOC)
,
[1]
system()
built-in function
HOC built-in function
T
t (built-in variable)
(HOC built-in variable)
t() (HOC ParallelContext method)
(ParallelContext method)
tail() (HOC StringFunctions method)
(StringFunctions method)
take() (HOC ParallelContext method)
(ParallelContext method)
tanh()
built-in function
HOC built-in function
tanh() (HOC Vector method)
(Vector method)
target() (HOC KSTrans method)
(KSTrans method)
target_var() (HOC ParallelContext method)
(ParallelContext method)
tell() (File method)
(HOC File method)
test() (in module neuron)
,
[1]
test_rxd() (in module neuron)
,
[1]
Testlevel() (Electrode method)
(HOC Electrode method)
text() (HOC SymChooser method)
(HOC TextEditor method)
(SymChooser method)
(TextEditor method)
TextEditor (built-in class)
(HOC built-in class)
this (built-in variable)
(HOC built-in variable)
this_node()
built-in function
HOC built-in function
this_section()
built-in function
HOC built-in function
thread_busywait() (HOC ParallelContext method)
(ParallelContext method)
thread_ctime() (HOC ParallelContext method)
(ParallelContext method)
thread_how_many_proc() (HOC ParallelContext method)
(ParallelContext method)
thread_stat() (HOC ParallelContext method)
(ParallelContext method)
Threads() (HOC ParallelContext method)
(ParallelContext method)
threshold() (HOC ParallelContext method)
(ParallelContext method)
time() (HOC ParallelContext method)
(ParallelContext method)
timeout() (HOC ParallelContext method)
(ParallelContext method)
Timer (built-in class)
(HOC built-in class)
to_python() (HOC Vector method)
(Vector method)
to_vector() (HOC Matrix method)
(HOC RangeVarPlot method)
(Matrix method)
(RangeVarPlot method)
topology()
built-in function
HOC built-in function
trans() (HOC KSChan method)
(KSChan method)
transfer() (HOC Impedance method)
(Impedance method)
transfer_phase() (HOC Impedance method)
(Impedance method)
transition() (HOC StateTransitionEvent method)
(StateTransitionEvent method)
transpose() (HOC Matrix method)
(Matrix method)
trigavg() (HOC Vector method)
(Vector method)
trueparent() (HOC SectionRef method)
type() (HOC KSTrans method)
(KSTrans method)
U
uniform() (HOC Random method)
(Random method)
uninsert (keyword)
,
[1]
unique() (HOC SectionList method)
(SectionList method)
units()
built-in function
HOC built-in function
unix_mac_pc()
built-in function
HOC built-in function
unlink() (File method)
(HOC File method)
unmap() (Deck method)
(Graph method)
(HOC Deck method)
(HOC Graph method)
(HOC PlotShape method)
(HOC Shape method)
(HOC VBox method)
(PlotShape method)
(Shape method)
(VBox method)
unpack() (HOC ParallelContext method)
(ParallelContext method)
unref()
built-in function
HOC built-in function
upkpyobj() (HOC ParallelContext method)
(ParallelContext method)
upkscalar() (HOC ParallelContext method)
(ParallelContext method)
upkstr() (HOC ParallelContext method)
(ParallelContext method)
upkvec() (HOC ParallelContext method)
(ParallelContext method)
use_daspk() (CVode method)
(HOC CVode method)
use_fast_imem() (CVode method)
(HOC CVode method)
use_local_dt() (CVode method)
(HOC CVode method)
use_long_double() (CVode method)
(HOC CVode method)
use_mcell_ran4()
built-in function
HOC built-in function
use_mxb() (CVode method)
(HOC CVode method)
userid() (HOC ParallelContext method)
(ParallelContext method)
V
v (rxd property)
,
[1]
val (Pointer attribute)
val() (HOC Pointer method)
valid() (HOC NetCon method)
(NetCon method)
value (rxd.node.Node property)
(rxd.nodelist.NodeList property)
value_to_grid() (rxd.nodelist.NodeList method)
ValueFieldEditor (built-in class)
(HOC built-in class)
var() (HOC Vector method)
(Vector method)
variable() (HOC PlotShape method)
(PlotShape method)
variable_domain()
built-in function
HOC built-in function
VBox (built-in class)
(HOC built-in class)
VClamp (built-in class)
(HOC built-in class)
VClamp() (Electrode method)
(HOC Electrode method)
VClampFamily() (Electrode method)
(HOC Electrode method)
VClampigraph() (Electrode method)
(HOC Electrode method)
Vector (built-in class)
(HOC built-in class)
vector() (Graph method)
(HOC Graph method)
(RangeVarPlot method)
Vector.x (built-in variable)
(HOC built-in variable)
vector_play_init() (BBSaveState method)
(HOC BBSaveState method)
vfixed() (Graph method)
(HOC Graph method)
view() (Graph method)
(HOC Graph method)
(HOC PlotShape method)
(HOC Shape method)
(PlotShape method)
(Shape method)
view_count() (Graph method)
(HOC Graph method)
(HOC PlotShape method)
(HOC Shape method)
(PlotShape method)
(Shape method)
view_info() (Graph method)
(HOC Graph method)
view_size() (Graph method)
(HOC Graph method)
volume (rxd.node.Node property)
(rxd.nodelist.NodeList property)
vread() (File method)
(HOC File method)
(HOC Vector method)
(Vector method)
vtransfer_time() (HOC ParallelContext method)
(ParallelContext method)
vwrite() (File method)
(HOC File method)
(HOC Vector method)
(Vector method)
W
wait_time() (HOC ParallelContext method)
(ParallelContext method)
want_all_spikes() (HOC ParallelNetManager method)
(ParallelNetManager method)
wcnt() (HOC NetCon method)
(NetCon method)
weibull() (HOC Random method)
(Random method)
where() (HOC Vector method)
(Vector method)
while (keyword)
,
[1]
wholetree() (HOC SectionList method)
(Section method)
(SectionList method)
window_place() (HOC PWManager method)
(PWManager method)
WinExec()
built-in function
HOC built-in function
wopen()
built-in function
HOC built-in function
wopen() (File method)
(HOC File method)
working() (HOC ParallelContext method)
(ParallelContext method)
Wrapper (class in neuron)
,
[1]
writehoc() (HOC SaveState method)
(SaveState method)
X
x (rxd.node.Node1D property)
(rxd.nodelist.NodeList property)
x3d (rxd.node.Node property)
x3d()
built-in function
HOC built-in function
xaxis() (Graph method)
(HOC Graph method)
xbutton()
built-in function
HOC built-in function
xcheckbox()
built-in function
HOC built-in function
xexpr() (Graph method)
(HOC Graph method)
xfixedvalue()
built-in function
HOC built-in function
xlabel()
built-in function
HOC built-in function
xmenu()
built-in function
HOC built-in function
xopen()
built-in function
HOC built-in function
xopen() (File method)
(HOC File method)
(in module neuron)
,
[1]
xpanel()
built-in function
HOC built-in function
xpvalue()
built-in function
HOC built-in function
xradiobutton()
built-in function
HOC built-in function
xred()
built-in function
HOC built-in function
xslider()
built-in function
HOC built-in function
xstatebutton()
built-in function
HOC built-in function
xvalue()
built-in function
HOC built-in function
xvarlabel()
built-in function
HOC built-in function
Y
y3d (rxd.node.Node property)
y3d()
built-in function
HOC built-in function
yaxis() (Graph method)
(HOC Graph method)
ygather() (CVode method)
(HOC CVode method)
yscatter() (CVode method)
(HOC CVode method)
Z
z3d (rxd.node.Node property)
z3d()
built-in function
HOC built-in function
zero() (HOC Matrix method)
(Matrix method)
Read the Docs
v: 8.1.0
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